Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVSSDTELIKSTIMSIIDQNKGRDIVTFDVQNKTIIAKYMIIASGDSSRHVKALAEHVMKSLKQ--YYKMDVEGMDEGNWVILNFQGIMVHIFRPEVREYYKIEELWN
4WCW Chain:C ((25-109))
-------------------------DVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFAALDRLWG
General information:
TITO was launched using:
RESULT:
Template:
4WCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69029 for 527 contacts (-131.0/contact) +
2D Compatibility (PS) -9235 + (NN) -6009 + (LL) 1704
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -91169.0 ( -173.00 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_4WCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WCW-query.scw
PDB file :
Tito_Scwrl_4WCW.pdb
: