Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALF-----QQEC-N-------SVDSWPFKKNLDSIALHEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEPAKDIL-LQSSFLFVRGNHENCDRAYEG----------------WFRYLDSHPFSS--EKCENFVPGWFLDIGPMKFFIFDSSSGEDI-F--TTQSTIDAFEKQFDKLT--QDS---SDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKFPNNVATIVSGHIHIAQILLMN---N-VPDQIIVGNGGALLHAQDQEPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNHEFTFYDQNNEEMYSAKLTEDFKLEIN |
| 2XMO Chain:A ((37-307)) | --------------------------------------------------------------------------------------------------DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKT------------SHEE----LAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDV--KGYTINYNQQVIDALT---EGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSVFPHKYGNITYSAKNKNFTYQSQKLDMEAWAKAQGSTDENLLNFDQFDYETFYNSGYDKAMMDLMTDESYDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79344 for 1851 contacts (-42.9/contact) +
2D Compatibility (PS) -24140 + (NN) -9119 + (LL) 7932
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -108821.0 ( -58.79 by residue)
QMean score : 0.335
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