Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSEKIELIFEKLKQSNPIPKIELSYTNHFTLLVAIVLSARTTDVSVNKITKELFSIANTPEKMLNLGQSELKKHISSIGLYNSKAKNIIELSRILVERHTSKVPTNFDDLVSLPGVGRKSANVFLNSGLGIPTLAVDTHVFRVSNKIGLVKEKDVFK--TEKSLLNVVPKKYLLYA-----HHWLVLHGRYVCKAQKPSCKTCIIHDLCEFECKRYKV
4YPR Chain:A ((38-218))---------------------------DPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYY-SRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTD-DIAKCSTRKRFEQIV-REIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAE


General information:
TITO was launched using:
RESULT:

Template: 4YPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96093 for 1330 contacts (-72.3/contact) +
2D Compatibility (PS) -17834 + (NN) -6217 + (LL) 1944
1D Compatibility (HY) -12400 + (ID) 2300
Total energy: -132900.0 ( -99.92 by residue)
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_4YPR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YPR-query.scw
PDB file : Tito_Scwrl_4YPR.pdb: