Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTPITVAYGDGIGPEIMEAVLSMLR--EAEAKISIDVIEIGERVYNKEWSYGISPSGWESIERTKVLLKSPTT------------------TSQGKGHKSLNVALRKSLGLYANIRPCTSYHPVIENKFDRFDIVVIRENEEDVYTGIEHRLTGNS-----YQCTKIITRSGSEKICRYAFNYAKR------------HNRKKVTCLTKDNIMKMTDGIFHTAF---DSIAKEYPDIKAEHYIVDIGMARVATEPENFDVIVTENLYGDILSDIVAQTSGSVGLAGSSNIGSEYAMFEAVHGSAPNIAGKNIANPSGLLNAAVHMLIYIGQADVAKLVHDAWLKTLEDG-IHTADLYKEKKSKQKVGTKEFAEAVIDNIGKKPGILPELIISNGVSSKISKIQGNCEQDYKVRKLVGSDITLAWDKSSNFNQIVKLFESSNPKVIAIYSKGLAIWPGDSKSLSDQVTCRFIANNEKKTITNIDVNNLLIKLERNSFDVVRMDKLYLYDEKEGFFS |
3TY3 Chain:A ((18-364)) | ---------ADGIGKEVVPAARRLMENLPAKHKLKFDFIDLD--------------AGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVAGYSSPIVALRKKMGLYANVRPVKSLDGA---KGKPVDLVIVRENTECLYVK-EERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGDNFVMSEPVHGSAPDIAGRGIANPVATFRSVALMLEFMGHQDAAADIYTAVDKVLTEGKVLTPDL------GGKSGTNEITDAVLANIHN-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122558 for 2469 contacts (-49.6/contact) +
2D Compatibility (PS) -32890 + (NN) -8570 + (LL) 10108
1D Compatibility (HY) -22800 + (ID) 6400
Total energy: -183110.0 ( -74.16 by residue)
QMean score : 0.436
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