Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTLVNILFIMIPLLFSVAYLVYFERKVIGAIQLRHGPSVVGPFGLLQPFADAIKLLVKEPIIPFRANTILFIMAPMLTFILALIVWAVIPFGAEVITENGQQIVIPKVIANVNIGVLYVLAISSLGIYGIIVAGWSSNSNYAFLGSIRSAAQMISYEVSMGLIVATVVITTGTLNLGEMVATKHSMPFWIDLLMMPIGVVFFISLLAETNRHPFDLPEAEAELVSGYNVEYSSMPFALFFLGEYANMILGSAMMTIFFLGGWYPPLKLSLLYKIPGLIWFVLKIVLLLFIFVWTRATIPRYRYDQLMRLGWKVFLPISVLWVILISGVLLFTGNLPGRGL |
2LD7 Chain:B ((468-498)) | ------------------------FDKVRKALRS---AE------AYENFLRCLVIFNQEVISR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10042 for 136 contacts (-73.8/contact) +
2D Compatibility (PS) -3171 + (NN) -312 + (LL) 27388
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 12363.0 ( 90.90 by residue)
QMean score : 0.145
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