Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLELKNKISAEAPKTDPSLAGVAANAILDVLGAVPSKPLRVQAELYKKESNNEEMDHTRDSGINNQSSGIKKSASEGTLFSESWDSKKTSGDWKRLLDNKPGDGSDTPPTPFTPKDDSYIENSETDSTTPLISSGKKTNRVWPRVKYAMQQKGVIIFGANTIILCTSLALVYLQDKAKFIVFFANSPFYITILVIASASLFAVSPIFHIIKQFRDAEEYQIQKGNANEILDKVLECQPRDKVIKSVRLEYSNDTHSNFALNAWEAKDNFINIGEKVISRANKIESIINNRPLFIALLTSVVAANIAFPLGLLAIDGINNVQKFYQNPLTHNVGLSLFIGSGILALSIICLGVHYYRKTNCTNLIYSQEKINTESVNKKFIKKIEQERTNVLKDNHGKDAKCISLTLEQVVVQSHNCKDIVYSIGE |
| 4H44 Chain:B ((98-143)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLAMASVPLGLILVPFIENVNKF-QNPFRRPVATTVFLFGTLVTLWLGIGAALPLDKSLTLGLF------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H44.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12639 for 205 contacts (-61.7/contact) +
2D Compatibility (PS) -4580 + (NN) -715 + (LL) 22836
1D Compatibility (HY) -6400 + (ID) 850
Total energy: -2348.0 ( -11.45 by residue)
QMean score : -0.078
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