Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNPLEQFKIHTIVELPKLFGHDINFTNSSLFMMISVVSVILFLLLGVRKGAVIPGYLQAAVEYVYDFITSIIESNTGSKGLKHIPLVFTVFTFTLSCNLVGMLPYS----------------FTVTSHVIVTFALSMIVFTYTTIVGFKEKGINFLRILLPEGIPSWLAPMMVFIKLFAYLARPISLSIRLAANMIAGHTIIKVVAGFIMNMHLILTPIPFLFIIALIGFEVFVAILQAYIFTILTCIYLSDAVK
1C17 Chain:M ((97-265))
--------------------------------------------------------------------------------KSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMK---------------------------SLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWS------QWILNVPWAIFHILIITLQAFIFMVLTIVYLS----
General information:
TITO was launched using:
RESULT:
Template:
1C17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85494 for 771 contacts (-110.9/contact) +
2D Compatibility (PS) -12205 + (NN) 116 + (LL) 10088
1D Compatibility (HY) -19200 + (ID) 2000
Total energy: -108695.0 ( -140.98 by residue)
QMean score : -0.056
(partial model without unconserved sides chains):
PDB file :
Tito_1C17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C17-query.scw
PDB file :
Tito_Scwrl_1C17.pdb
: