Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPRYSRKEISAIWEENNKFNIWLKIERLACEAQAKLG--VIPSNVAKRLSGAITFDVERINEIESTVKHDVIAFLTYIAEKVGVDVRYLHYGMTSSDVLDTCFAVQLKESCNILLENLKNLLAALKKKAEDYKGTICVGRSHGMHAEPTTLGLKFTRFYAEFKRSYQRLINAQKEISICKISGAVGNFANVDPFVE---EYVAKGMELVPET--------ISSQVIPRDRHAMFFSVLGVIASSMENVAVEIRHLQRTEIAEIAEYFSTGQKGSSAMPHKCNPILSENLTGLSRLIRSYVSPALENV-VLWHERDISHSSVERCIAPDACILMDFALVRLTDLIDKLAINKENIEKNLNSSKGLIFSQRILLELVNSGLTREEAYKII----QGNAMKVKQNNSDF-LFELKQDRSLLEVINSEKLESLFDLKYYTKYVDHIYKKVFD |
| 2J91 Chain:A ((42-472)) | ---RYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDEQIREMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTDLIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLCMDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITGQTYTRKVDIEVLSVLASLGASVHKICTDIRLL--ANLKEMEEPF-----------YKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISEGLVVYPKVIERRIRQELPFMATENIIMAMV--GGSRQDCHEKIRVLSQQAASVVKQEGGDNDLIERIQVDAYFSPIHSQ-LDHLLDPSSFTGRASQQVQRFLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J91.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213641 for 3143 contacts (-68.0/contact) +
2D Compatibility (PS) -42035 + (NN) -10500 + (LL) 468
1D Compatibility (HY) -20000 + (ID) 5000
Total energy: -290708.0 ( -92.49 by residue)
QMean score : 0.490
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