Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILISLLFILIFYSSANAFTLDDKLRDKNMEKRATNLFEMIKCPICSG--ESLSESGSQVAYNMRKMIREKISDGYTDEQITSELRNSYGDSIIIVPPVKFSTYILWLIPLVIPLIGCFLIRNIIK
4GRI Chain:A ((406-456))
------------FYEDIKSWNLDEF-------KEVCSILELIK-PILEGFEKRSSEENDKIFYDFAESNLGEILLPIRIAALGSKVSPPLFDSLKLIGKSKVFERIKLAQEFLRIN-----------
General information:
TITO was launched using:
RESULT:
Template:
4GRI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2546 for 150 contacts (-17.0/contact) +
2D Compatibility (PS) -4361 + (NN) -602 + (LL) 3600
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -9009.0 ( -60.06 by residue)
QMean score : 0.010
(partial model without unconserved sides chains):
PDB file :
Tito_4GRI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GRI-query.scw
PDB file :
Tito_Scwrl_4GRI.pdb
: