Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKESSKTKLSEDYTPSEDEEYMSVR--------QLEYFNLKLESILAELEKQELEDSAYYFDE-DSGNEKLIKRRKDR----KEKIKEALEKIKLGTYGYCDRTGEE------IGIARLKANPLA-VYCIEEQERLEKEKNVYKTDD |
| 4MD8 Chain:A ((26-137)) | -----------------DEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDE---DNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22529 for 425 contacts (53.0/contact) +
2D Compatibility (PS) -9253 + (NN) -3053 + (LL) 1140
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: 4463.0 ( 10.50 by residue)
QMean score : 0.272
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