Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDNIIIITGITASGKSELCDNLIKKYGNISIVNCDSKQVYKEIPIITAQPPKQ---EEFYRLYGCVPAKENYSVGLWLEDLKGEVDHALENARMPIITGGSGLYISSLINSLSPIPKVSEEIRKNVSELRKNLSKEEFYKLVLSKDSKIQGKISTNDLHRLSRALEVITATGKSIFVWQESRQLPLFDNFKIYT-----ILP-KREDVYRKINSRFVTMIESGAVDEVKKL-LNMNLAPHLPAMRAHGVPEIIKYLKGKITLSEAIQIAQTNTRHYAKRQYTWFKNQFPNSEVIDCANKLIEFEIF |
| 3CRR Chain:A ((8-294)) | -----IFLMGPTAAGKTDLAMALADAL-PCELISVDSALIYRGMDIGTAKPSRELLARYPHRLIDIRDPAESYSAAEFRADALAAMAKATARGRIPLLVGGTMLYYKALLEG-------------------------------------------------------------------------------LPYTVAQLAIAPEQRQVLHARIAQRFRQMLEQGFIAEVEALHARSDLHAGLPSIRAVGYRQVWDYLDGKLSYAEMTERGIIATRQLAKRQFTWLRSWSHLHWMDSLAGDNLPRALR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CRR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111762 for 1485 contacts (-75.3/contact) +
2D Compatibility (PS) -20563 + (NN) -8136 + (LL) 5964
1D Compatibility (HY) -12800 + (ID) 3100
Total energy: -150397.0 ( -101.28 by residue)
QMean score : 0.488
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