Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFLSVIGIKEPVSNKQLYEHCDIRII-FTKRDVIPVPRHWDPEDSITN-------GHTKQLYNKNWIPVSRTGMTG---------KGFEMTESNTGKLVHDRKLLFISSDIKSFFFAIRIE |
1W4Z Chain:A ((82-161)) | ---------------------CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6374 for 315 contacts (20.2/contact) +
2D Compatibility (PS) -6051 + (NN) 3103 + (LL) 1600
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -74.0 ( -0.23 by residue)
QMean score : 0.043
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