Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNQVIKHKKKDFSLAFKNKLALSNLFYRGLYISLYAIKERAPEKHVDIIRVGIVISKKAGKATKRNKIKRRLRVLARTNILDISNIGY-YYIILTHKNIMQASYKNLRKDITICLKKIK
1MWU Chain:A ((128-175))
----------------------------------------------------------------------ERGKILDRNNV-ELANTGTAYEIGIVPKNVSKKDYKAIAKELSISEDYIK
General information:
TITO was launched using:
RESULT:
Template:
1MWU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10432 for 189 contacts (-55.2/contact) +
2D Compatibility (PS) -4815 + (NN) 188 + (LL) 5944
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -11865.0 ( -62.78 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1MWU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MWU-query.scw
PDB file :
Tito_Scwrl_1MWU.pdb
: