Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNSGQQKFAELEGNRKVLSKRVLRKVEITTVSKGQNNSAASEKNFLRQRANLSKLKKELSKLLVLMIRLKLYRIDKMICERNLINLSNIVNYLCL
3ZJB Chain:A ((6-19))
-----------------------------------------------RQRQELQELRRELEELSVGSDGVLIWKIGSYGRRLQEAKAKPNLECFSP
General information:
TITO was launched using:
RESULT:
Template:
3ZJB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2738 for 46 contacts (59.5/contact) +
2D Compatibility (PS) -1539 + (NN) -1751 + (LL) 3208
1D Compatibility (HY) -1200 + (ID) 350
Total energy: 1106.0 ( 24.04 by residue)
QMean score : 0.844
(partial model without unconserved sides chains):
PDB file :
Tito_3ZJB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZJB-query.scw
PDB file :
Tito_Scwrl_3ZJB.pdb
: