Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVDIVFRYKDDYNEFVKLLDLKKHSYICRSRQDEKGSDVLLKHMHDKKDRATIKMLMPNKCAVFVSKDRANKFIKNTLKIEVEVLSS
2HBA Chain:A ((28-47))
------------------------------------------------------NFLFKQGLAIEATPANLKALEAQKQ---------
General information:
TITO was launched using:
RESULT:
Template:
2HBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4726 for 78 contacts (-60.6/contact) +
2D Compatibility (PS) -1916 + (NN) 326 + (LL) 4704
1D Compatibility (HY) -1600 + (ID) 100
Total energy: -3312.0 ( -42.46 by residue)
QMean score : 0.174
(partial model without unconserved sides chains):
PDB file :
Tito_2HBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HBA-query.scw
PDB file :
Tito_Scwrl_2HBA.pdb
: