Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHDIDKQLQEQVNNLDRTEKSAAELERKIQEHKEEFMKKEKKQTTGRDKYRAYKKEQNSF
2WWB Chain:N ((9-39))
----------------LRTKSKEQLASQLVDLKKELAELKVQKLSRPSLPKIKTVRKSIA
General information:
TITO was launched using:
RESULT:
Template:
2WWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8748 for 124 contacts (70.5/contact) +
2D Compatibility (PS) -3515 + (NN) -3942 + (LL) 1140
1D Compatibility (HY) -800 + (ID) 250
Total energy: 1381.0 ( 11.14 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_2WWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WWB-query.scw
PDB file :
Tito_Scwrl_2WWB.pdb
: