Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKTKLSLLLIAVFLLNIDFLLSCPVFADGVSGTDKTEFVSRF---SSAGSFSRA----SNP---DCGAFKTAAAIAGIAIAVGAVWTGIVLIFSSSGLFTALVIVGMIAAIVGVWKAIGGLVVCEHSFVRHPVARDHDGEYKDFALLDGGYADCTNKNYQKEDEYFSCLQNKTRKNANKEDYDRKRAEREALNPNVQNNTGNYYWPKNSVQYSEYIEVCHRNPLTFGNLFKKEDFDRRGEDKYINFDVREKDTGYVDGSWSPKVDGDLDCKVLKAGQSKTIHGSTFKALRKMGRLCVELASISTLGISMTPWPQGVDMGCTELPPDPLAPMCDESKMKFKNKGGIIITDPNPIKDLLKGNESKDYKTLIREREEKKEIFVGYDNKGCFSSYVSEACHNQAGSKSLAPIPITSMIVQCIKESLDNLVAGKGTPNGESFISVAQERLKNTITAVLVLALILFSIKAMSGGVHSPQEMYMLIIKFALVIYFTTGNTMSHYYGELTKLSNGLSEIVLKASSESKGICNYEAKDYKNDTTNYSYLAPWDRLDCRILFYLGAPLDGIAGKIGTGDVGILAILLGAAPALLVAGSVIGIICAGGQILVALVAIFMAIMMMMVILWMCYVFILSLIALSIIIILSPLFIPMVLFQHTKGYFDGWLRELITYSLYPVMLFAFLSFMFIACDKIYFKNLHFEKEEKIKILGNEKQWFKLKSGECDKNENTLACMMQNYKWEKSNILGLFDFTYMEFGNSLIGELLKLALILFLFYHFLNILPDMAAELSGNHRAALGSGATPGKMMSKAFSVAKAIAGAVGKAHSGDAAGAAKEAQKARDDSRALASGNADDKSGRSPATVGSEAANATGEAIRGTADAAQSAASEAANSTES |
1S46 Chain:A ((408-458)) | -----------------------------GISGYDHRQFLNRFFVNRFDGSFARGVPFQYNPSTGDCRVSGTAAALVGLAQDDPHAVDRIKLLYSIALSTGGLPLIYLGDEVGTLNDDDWSQDSNKSDDSRWAHRPRYNEALYAQRNDPSTAAGQIYQGLRHMIAVRQSNPRFDGGRLVTFNTNNKHIIGYIRNNALLAFGNFSEYPQTVTAHTLQAMPFKAHDLIGGKTVSLNQDLTLQPYQVMWLEIA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -279 for 179 contacts (-1.6/contact) +
2D Compatibility (PS) -4114 + (NN) 2009 + (LL) 45636
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: 39402.0 ( 220.12 by residue)
QMean score : 0.278
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