Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYQYYNRIFNILLIIVLLLSNVTYADASESMHQIGSDIVVGLLKTEKETYPHELGLFQSIYEMFNSFGVRTVFIDCNKIINLKKIQEELLSLLKQDEMLAKKLILDRIKIEIGQFIKGHKINRIFIPENYYNLHSEPFPPTPCCQLVTEAIVKIVDDNPTIHLLSICGGLQGIMSAKGIEVVHVENFVSDEEQRRSHLKSAPN------PQQEDVTFQQIKIV-------PNSHLAKVVAKFLLPDKNGWFSTCFPDAHSGTVNNRPENRRKLELLGYKIAAFSNDGVIEAIEDK-HGNIYFQSHPEALVVKSDKNLHLSNHKARQVSTLVAMAIINDFLYRA |
| 3UOW Chain:A ((7-222)) | ------------------------------------YDKILVLNFGS---Q----YFHLIVKRLNNIKIFSETKDYGVEL--------------------------------KD-IKDMNIKGVILSGGPYSVTEA------GSPHLKKEVFEYFLEK-KIPIFGICYGMQEIAVQMNGEVKK--SKTSEYGCTDVNILRNDNINNITYCRNF---SSAMDLYSNYKLMN--CCLFENIKS---------DITTVWMNHNDEVTKI--------PENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKKFDPIRYHELELKN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95549 for 1623 contacts (-58.9/contact) +
2D Compatibility (PS) -20399 + (NN) -2472 + (LL) 8012
1D Compatibility (HY) -9200 + (ID) 1550
Total energy: -121158.0 ( -74.65 by residue)
QMean score : 0.362
|
|
|