Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKEIKTKTKER---MLKTIQSFYNDIKGIRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVTDNKTLLIKVWDIGVIGEVKNAILNANLNLNPVVEGNTIRIVLPDLTQETRERLVKLLHQFAENARVAIRNIRRDIMEEIERMQENKKISEDDFHNAKKEIQNITDDNIKKIDGELSIKEKDILNY
1GE9 Chain:A ((1-183))
MIKELEDIFKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKVEYYGSKVPIKQLGTISVPEHNQIVIQVWDQNAVPAIEKAI-REELNLNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE---GISEDEKKRALERLQKLTDKYIDEINKLMEAKEKEIMSV
General information:
TITO was launched using:
RESULT:
Template:
1GE9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69555 for 1254 contacts (-55.5/contact) +
2D Compatibility (PS) -19491 + (NN) -4629 + (LL) 264
1D Compatibility (HY) -16000 + (ID) 3750
Total energy: -113161.0 ( -90.24 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_1GE9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GE9-query.scw
PDB file :
Tito_Scwrl_1GE9.pdb
: