Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGGYITMETLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIMLAARACVFSGSGLITVATHPTNHSALHSRCPEAMVIDINDTK------MLTKMIEMT---DSILIGPGLGVDFKGNNAITFLLQNIQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPIEE--QTYERNREAVDRLGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMITSFVGQFDNLKEAVMSATYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES
3RTC Chain:A ((223-501))----ITREMVRSL-LPERPRDSHKGTYGKVLIIAGSRLYSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQECLELSKDVDVVAIGPGLGNNEHVREFVNEFLKTLE--KPAVIDADAINVLDTSVLKERKSPAVLTPHPGEMARLVKKTVGDVKYNYELAEEFAKENDCVLVLKSATTIVTDGEKTLFNITGNTGLSKGGSGDVLTGMIAGFIAQGLSPLEASTVSVYLHGFAAELFEQDERGLTASELLRLIPEAIRRLK-


General information:
TITO was launched using:
RESULT:

Template: 3RTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -197358 for 2475 contacts (-79.7/contact) +
2D Compatibility (PS) -29036 + (NN) -10772 + (LL) -248
1D Compatibility (HY) -11200 + (ID) 4100
Total energy: -252714.0 ( -102.11 by residue)
QMean score : 0.542

(partial model without unconserved sides chains):
PDB file : Tito_3RTC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RTC-query.scw
PDB file : Tito_Scwrl_3RTC.pdb: