Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPASILNKSVKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGK--LLNANISQSVKVSDNNL--KDLKDYVNKRVFKGSEYQLSEINSGSVKYEQTYDNFPILNNSKAMLNFNIEDNKAASYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNNPKIINH |
3NB2 Chain:A ((39-133)) | ------------------------------------------------------------LSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSI-LNECNFCYANLSNCIIRALFENSNFSNSNLKNASFKGSSYIQYPPILNEA-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 34621 for 723 contacts (47.9/contact) +
2D Compatibility (PS) -9486 + (NN) -427 + (LL) 12260
1D Compatibility (HY) -7200 + (ID) 1200
Total energy: 28568.0 ( 39.51 by residue)
QMean score : 0.136
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