Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------------------------MLVCMCFKVLKTLKIGCTEKPHLLKL---------------------
2HGC Chain:A ((5-82))
KLRYAILKEIFEGNTPLSENDIGVTEDQFDDAVNFLKREGYIIGVHYS---------DDRPHLYKLGPELTEKGENYLKENGTWSKA
General information:
TITO was launched using:
RESULT:
Template:
2HGC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5271 for 51 contacts (-103.4/contact) +
2D Compatibility (PS) -1615 + (NN) 3907 + (LL) 812
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -4817.0 ( -94.45 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_2HGC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HGC-query.scw
PDB file :
Tito_Scwrl_2HGC.pdb
: