Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIKNRTQVETWWRWYRNGESYRFSQHVGKQYTYGKGLEELSEVEQLKLENKRKDIELDILKKYKALERKWYQQ
1K78 Chain:A ((30-78))
--GRPLPDVVRQRIVELAHQGVRPCDISRQLRVSH-GCVSKILGRYYETGSI----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11093 for 300 contacts (-37.0/contact) +
2D Compatibility (PS) -5361 + (NN) -2095 + (LL) 4692
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -17057.0 ( -56.86 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1K78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K78-query.scw
PDB file :
Tito_Scwrl_1K78.pdb
: