Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSLIQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
2PL1 Chain:A ((3-117))
----VLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMR-----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2PL1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88170 for 880 contacts (-100.2/contact) +
2D Compatibility (PS) -13089 + (NN) -10750 + (LL) 9236
1D Compatibility (HY) -9600 + (ID) 2700
Total energy: -115073.0 ( -130.76 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_2PL1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PL1-query.scw
PDB file :
Tito_Scwrl_2PL1.pdb
: