Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIVLFLIVFILLSLIVSRYLYSVALNVPSKIDVVFNPIEKLIYQLIGTKLEHMSGKTYIKHFLLFNGLMGGLSFVLLLIQQWLFLNPNHNLNQSVSLAFNTMASFLTNTNLQHYAGETDLSYLTQMCVITFLMFTSAASGYAVCIAMLRRLTGMTDVIGNFYQDITRFIVRVLIPFALIISLFLISQGTPQTLKGNLVIETL-SGVKQTIAYGPMASLESIKHLGTNGGGFLGANSSTPFENPTYWSNYAEALSMMLIPGSLVFLFGRMLKTKLQIHPHAIMIFVAMFVMFIGFLVTCLYFEFAGNPVLHHLGIAGGNMEGKETRFGIGLSALFTTITTAFTTGTVNNMHDSLTPLGGMVPMVLMMLNAVFGGEGVGLMNMLIYVMLTVFICSLMIGKTPSYLGMKIEGKEMKLIALSFLVHPLLILVFSALAFIVPG--ASDALTNPQFHGVSQVLYEFTSSSANNGSGFEGLGDNTVFWNISTGIVMLLARYIPIVLQILIVSSLVNKKTYQQHTQDVPINNLFFSSVLIIFIILLSGLTFLPDL-MLGPIGEQLLLHA |
| 4EPQ Chain:A ((34-472)) | DYQFPLPQKNSELWIIQKKTLQDLSSG-KQKLDS-FQSLESILEILRDSKNQN------DEKYFNLKAVFEQLD----KEEQTYFLE--QFIPKICQLVLKIKKKQLKNQIPKESKIYEAAFSREEISYYVSCMF--------LCI--------LKDQDRKIYKDFRLIYLKDLV--------------QQINIRRQEKIKCFYEYLKQALDFSEKESKEVVIFQRINCG------------QLEDYENWVDKLKAIKLKN--VQLTDDKL---IEDFPGTLQVDFAN--CDIGG------------------GILGNGLVQEEIRFCVCPEMLVSLLV----------FDQSMEA-----NEVIIMK---------GIKQYSDYQGYSNSFRFVKMGNS------KIQKQKRT--------NPQTILAIDALCFNSSDNQFSEVNVSRELN-KSYMGFKQEDQLKTISTGKWGCGAFLGVFDLKFAIQWIASSRSNKKMIICTFQDEQTTKQIQQVFDLYKQKN---ASIFLKLVMDYPNSKYMEDYTLLEYLIELGKEKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -410452 for 3631 contacts (-113.0/contact) +
2D Compatibility (PS) -44452 + (NN) 7727 + (LL) 8076
1D Compatibility (HY) -12000 + (ID) 3850
Total energy: -454951.0 ( -125.30 by residue)
QMean score : 0.224
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