Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYDKKMINRINRIQGQLNGIIKMMEEGKDCKDVITQISASKSSLQRLMGIIISENLIECVKVAADDEESSQELINEAVNLLVKSK
2HH7 Chain:A ((7-88))
-AKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFSTAVLDGH-GQAAIEELIDAVKF--
General information:
TITO was launched using:
RESULT:
Template:
2HH7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2218 for 446 contacts (-5.0/contact) +
2D Compatibility (PS) -8656 + (NN) -1009 + (LL) 216
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -18167.0 ( -40.73 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_2HH7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HH7-query.scw
PDB file :
Tito_Scwrl_2HH7.pdb
: