Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFKQFYDNHLSQASYLVGCQRTGEAIIIDPVRDLS------------KYIEVADSEGLTITQATETHIHADFASGIRDVAKRLNANIYVS---GEGEDALG--YKNMPS----KTQF---VKHGDIIQVGNVKLEVLHTPGHTPESISFLLTD-LGGGSSVPMGLFSGDFIFVGDIGRPDLLEKSVQIKGSTEISAKQMYESVQNIKNLPDYVQIWPGHGAGSPCGKALGAIPISTIGYEKINNWAFNE-IDETKFIESLTSNQPAPPHHFAQMKQVNQFGMNLYQSYDVYPSLDNKRVAFDLRSKEAFHGGHTKGTINIPYNKNFINQIGWYLDFEKDIDLIGDKSTVEKAKHTLQLIGFDKVAGYRLPKSGISTQSVHSADMTGKEEHVLDVRNDEEWNNGHLDQAVNIPHGKLLNENIPFNKEDKIYVHCQSGVRSSIAVGILESKGFENVVNIREGYQDFPESLK |
4EFZ Chain:A ((5-257)) | MTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAFVGDTLFMPDYG-----TARCDFPGG---DARSLYRSIRKVLSLPPATRLYMCHDY-QP---AIQY--ASTVADELRENVHIREGVTEDDFVAMRTAR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84150 for 1837 contacts (-45.8/contact) +
2D Compatibility (PS) -24239 + (NN) -8576 + (LL) 11180
1D Compatibility (HY) -12000 + (ID) 3100
Total energy: -120885.0 ( -65.81 by residue)
QMean score : 0.446
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