Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDSVVIGGLYDNRLLVKATKSVRHQ-LQDNTLVSPYPGAKEMILIPDITEAINLTNLFELIKNDLKN
3LV9 Chain:A ((75-143))
------IRDLYNQKINENKIELEEILRD-IIY--------ISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEI---------------
General information:
TITO was launched using:
RESULT:
Template:
3LV9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14600 for 367 contacts (-39.8/contact) +
2D Compatibility (PS) -6973 + (NN) -1724 + (LL) 1708
1D Compatibility (HY) -6800 + (ID) 1050
Total energy: -29439.0 ( -80.22 by residue)
QMean score : 0.112
(partial model without unconserved sides chains):
PDB file :
Tito_3LV9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LV9-query.scw
PDB file :
Tito_Scwrl_3LV9.pdb
: