Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MICSQTLFRYPTHMIFLMKHNYMIDCIILLNNLLQTC----HFTLKIYIISDDILQVIYK--------------------------
1X9A Chain:A ((1-87))
MALVLVKYGTDHPVEKLKIRSAKAEDKIVLIQNGVFWALEELETPAKVYAIKDDFLARGYSEEDSKVPLITYSEFIDLLEGEEKFIG
General information:
TITO was launched using:
RESULT:
Template:
1X9A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49155 for 364 contacts (-135.0/contact) +
2D Compatibility (PS) -5636 + (NN) 1801 + (LL) 0
1D Compatibility (HY) 400 + (ID) 550
Total energy: -53140.0 ( -145.99 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_1X9A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X9A-query.scw
PDB file :
Tito_Scwrl_1X9A.pdb
: