Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MNKLRDTTF----------LSYLFTIILWGSAFPMIKIALNDFSAESLSAFR---------LILATIILLPFVI--------------IKKLPTPELRDIPVIF-----ILGFCGFVIYHTALNFGETLISAGIS-----GILVSTTPIFSSALAYIFLKEHFSKWN----WLSSLVAFIGISI--ISISKD-----DYTTINVLGVFIILLASFSESLYFTFQKKYIEK--------YGFIAFTLYTIMA--SSPF--MLIF------IPEIINDIHGATF--TSIVSVLYLAIFPTIIPYVLLAYIVKS--VGVSDATMSLY-----LTPIVSLLLSYLLLDELPTTLAIIGGIITLLGVSLSNFFQNT------------------------- |
| 4FDT Chain:A ((21-425)) | MQTKIQKYAGTAMPYPNRTDGMTPFYINHLGRHGARFPTSRKALDKVEKVLVSAQQENGLTSEGMALLSMIRRLSRLFDGQWGKLSKLGETEQEGIAGRMIRNYPQLFSNSAKIEAIATYV--PRSINSMDAFLSCMIRHNPALQVQRSEGKQYNHILRFFDLNKSYVNYKEKGDWLPIYKAFVHKKISPVPIMKKFLLNPEQYLDKEAEEFVMALFSVAAILPDTSIPLNLEDLFTLDEWHRYWQTQNLRQYMSKSSAPVGKMLPVAIAWPLLSEFIRSAQEVISGKSDYQANFRFAHAETVIPFVSLMGIEKTDVQVCRPDSVSVYWKDYEISPMAANVQWLFYRDRDQRIWVKILLNEEAAALPISTACFPYYSWEKTRIFFNQRIEMAKKTLSVFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -294279 for 2102 contacts (-140.0/contact) +
2D Compatibility (PS) -29281 + (NN) -381 + (LL) 296
1D Compatibility (HY) -10400 + (ID) 2950
Total energy: -336995.0 ( -160.32 by residue)
QMean score : 0.239
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