Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPY---IEYDWLQKGAFISNI-----SIMDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY |
1U7H Chain:A ((74-322)) | -----------------------------------------------------------------------------------HPANTARNLHTVMAFGVLADVDSGYPVLLSELTIATALRTAATSLMAAQALARPNARKMALIGNGAQSEFQALAFHKHLG-IEEIVAYDTDPLATAKLIANLKEYS-GLTIRRASSVAEAVKGVDIITTVT-ADKAYATIITPDMLEPGMHLNAVGGDCPGKTELHADVLRNARVFV--EYEPQTRIEGEIQQLPADFPV------VDLWRVLRGETEGRQSDSQVTVFDSVGFALEDYTVLRYVLQQAEKRGMGTKIDL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U7H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136159 for 1881 contacts (-72.4/contact) +
2D Compatibility (PS) -25695 + (NN) -12779 + (LL) 5688
1D Compatibility (HY) -14000 + (ID) 3000
Total energy: -185945.0 ( -98.85 by residue)
QMean score : 0.512
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