Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLEIPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFGDLMIGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIRMAIVSTVLGSIVSIPIALLCASNIVHQKWISIPSRFILNIVRTIPDLLLAAIFVAVFGIG--------------QIPGILALFILTICIIGKLLYESLETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGLVGA--GGIGLFYDQTLGLFQYPKTATIILFTLVIVVVIDYISTKVRAHLA |
| 2ONK Chain:C ((68-275)) | --------------------------------------------------------------------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARK---SFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ONK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186410 for 1442 contacts (-129.3/contact) +
2D Compatibility (PS) -19581 + (NN) 607 + (LL) 6156
1D Compatibility (HY) -12000 + (ID) 1100
Total energy: -212328.0 ( -147.25 by residue)
QMean score : 0.412
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