Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------MKFFVLCAIISMNIFIVISTFTKE-----------------VLGFPIEPVYYSTMVGIALITTVFAIYKIIVTQEIPRGLILLIAIC--LLYLAFYYFSPDKEEKLAKNN----------------------ILFFLTWAVPAAISGIYIKYINK------ATVERFFKLVFFIFSISFIFVILIPKLTGEIPSYINFGLMNYQNASYLSAFTAGLGIYFIMK---GSVKHKWIY-------VLFTIIDIPIVFIPGGRGGAILLILYGLFAFILITFKRGIPIAVKSIMYIFALSISSVLIYFLFTKGSNTRTFSYLQGGTLNLEGTSGRGPIYEKGIYFIQQSPLLGYGPFNYYKLIGNIPHNIIIELILSFGLLGFFIIMICILLLVYKMIRNYDPNTIDLLV-------------MFIAIYPITLLMFSSNYLVVSEFWFVLFYFITKGRRHHG---- |
| 1EHK Chain:A ((14-562)) | AYPEKKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLLPFVQSYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALPLLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVTYMAVVFWLMWFLASLGLVLEAVLFLLPWSFGLVEGVDPLVARTLFWWTGHPIVYFWLLPAYAIIYTILPKQAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADPGIDPTWKMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNA--SFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHWAGLLNV----PRRAY-IAQVPDAYPHAAVPMVFNVLAGIVLLVALLLFIYGLFSVLLSRLAEAPLPFAEVISGPEDRRLVLAMDRIGFWFAVAAILVVLAYGPTLVQLFGHLNPVPGWRLW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -356877 for 2837 contacts (-125.8/contact) +
2D Compatibility (PS) -37515 + (NN) 5695 + (LL) 368
1D Compatibility (HY) -22400 + (ID) 2750
Total energy: -413479.0 ( -145.75 by residue)
QMean score : 0.097
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