Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKESVVASLARNKKIAVETMAGQRYIIERILHTNDEKHIHILKPKDVVLDVDSIKEIDENHLNDAT
1JB0 Chain:D ((79-102))
------------------------DYKIYRIFPDGETVLIH---PKDGVFP----------------
General information:
TITO was launched using:
RESULT:
Template:
1JB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6605 for 89 contacts (74.2/contact) +
2D Compatibility (PS) -2490 + (NN) 543 + (LL) 3552
1D Compatibility (HY) -2000 + (ID) 500
Total energy: 5710.0 ( 64.16 by residue)
QMean score : 0.091
(partial model without unconserved sides chains):
PDB file :
Tito_1JB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JB0-query.scw
PDB file :
Tito_Scwrl_1JB0.pdb
: