Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIQQLQHHFGSHKVIHNFNLDISKGEIVTFIGKSGCGKSTLLNVIGGFIHPSSGRVIIDNEIKQQPSP---DCLMLFQHHNLLPWKTINDNIRIGFQQKISDEEINAQ--------LKLVDLEDRGKHFPEQLSGGMKQRVALCRAHVHKPNVILMDEPLGALDAFTRYKLQDQLVQLKHKTQSTIILVTHDIDEAIYLSDRIVLLGEGCNIISQYEITASHPRSRNDSHLLKIRNEIMETFALNHHQVEPEYYL
3PUY Chain:A ((4-210))
-VQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRK---PKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAG----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3PUY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101826 for 1470 contacts (-69.3/contact) +
2D Compatibility (PS) -21380 + (NN) -10944 + (LL) 3940
1D Compatibility (HY) -18400 + (ID) 3900
Total energy: -152510.0 ( -103.75 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3PUY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PUY-query.scw
PDB file :
Tito_Scwrl_3PUY.pdb
: