Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSKLPLFNHFANIRIQPKLIIKLFLTLIIIVTYTFVSGLSVDYKKLLSEAGLSETSLAQIKIFSQISIFFSRVFSVLFTFLIILVISRIMRSDANTKSIFSATLSYILFTNAISLIILTIQISAGLSLIDYSITSLNIFAKGNRILGTFDLQFFVQAYILTVMLIGTSKLSIRASTIWGIIYLILIITFSLISISIQ |
1G39 Chain:A ((1-28)) | ---------------------------------MVSKLSQLQTELLAALLESGLSKEALIQ------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 524 for 113 contacts (4.6/contact) +
2D Compatibility (PS) -2770 + (NN) 558 + (LL) 17688
1D Compatibility (HY) -1600 + (ID) 450
Total energy: 13950.0 ( 123.45 by residue)
QMean score : 0.250
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