Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRKRKWLIVICVLLVLITISQILKHFNYGTESKEAYNTYTVEKERQLDLQGKAYPREVKTYYKNNQVGTYLGVQVADGQTVKKGDMLINYKINSNKRQQLVDKINDTQHIITEVYLNITKGLNNREIQKKLIEYKQTLYEAQQQLYQYDSQNRDSMYASFDGKIMIKNIDN---DSDNQPILYLISK-ESHIKTSVTEFDLNKVKKGDKVNLSITSTGKTGAGIIKQISELPISYEENLSLHENDALHLPESNNDGELANSKSISASPIFKSNNNSELSKYGVIIDDLSLPIRAGYSLEIKVPLNAIKIPKSVLTKGNNVFIVNKNSIVEKRNIRIKRINGDIIVEKGLKPGDKLIKQPKSTMNDGDKVEISS |
| 2DN8 Chain:A ((10-99)) | ---------------------------------------------------VFEKENDPTVLR-SPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKM---------------------------------------------------------IMTLNVQERGRVKYI-KRPGAVLEAGCVVARLELDDPSKVHPSGPSS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -25396 for 511 contacts (-49.7/contact) +
2D Compatibility (PS) -9302 + (NN) -3980 + (LL) 18584
1D Compatibility (HY) 800 + (ID) 500
Total energy: -19794.0 ( -38.74 by residue)
QMean score : 0.430
|
|
|