Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGMFLSSFYATRKQTYIYFIVAIIAAGYFAVFNPLMSSAMAGVMLITPITDNIKHEKDSRWMYYVSTLPVKRSDYIKSYFAFYLILFGASLMIGLVVTTIVTQSVMIGIMSGLMSFGIIGAYSIIFPLT---FKFGA------ENSNVIMIVASILLLFSFVVFFFIYGMVSGASALEFEKISTEGWLVVIVYAVIGIVITSVSYILSIKIFNKQEL |
3G5U Chain:A ((708-768)) | ----------------------------------------------------------------------------------------------------------VVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFL--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40961 for 273 contacts (-150.0/contact) +
2D Compatibility (PS) -4977 + (NN) 1727 + (LL) 14828
1D Compatibility (HY) -7200 + (ID) 900
Total energy: -37483.0 ( -137.30 by residue)
QMean score : 0.193
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