Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNV-DGKIVSADVQAQTKQVLENLKVVLEEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELVSKIKEL
1X25 Chain:A ((1-121))
METVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIVKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAEYFKDKPPARVTVEVSRLPKDALIEIAVI------
General information:
TITO was launched using:
RESULT:
Template:
1X25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46234 for 893 contacts (-51.8/contact) +
2D Compatibility (PS) -13080 + (NN) -6316 + (LL) 584
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -78996.0 ( -88.46 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_1X25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X25-query.scw
PDB file :
Tito_Scwrl_1X25.pdb
: