Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILKGSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
3O7M Chain:A ((5-177))
-NIEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYG-------KVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRKVDLTAEYVGFQIPDEFIVGYGIDCAEKYRNLPFIASVVT-----
General information:
TITO was launched using:
RESULT:
Template:
3O7M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133885 for 1290 contacts (-103.8/contact) +
2D Compatibility (PS) -17704 + (NN) -3560 + (LL) 152
1D Compatibility (HY) -20400 + (ID) 3600
Total energy: -178997.0 ( -138.76 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3O7M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O7M-query.scw
PDB file :
Tito_Scwrl_3O7M.pdb
: