Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLHFAILFWLALI-FLVAATFILVLMKKTGKESKKESYLSFTVILYIFGFAILIYTFIFGVL
1XIO Chain:A ((7-63))
-------LHWIYVAGMTIGALHFWSLSRNPRG-VPQYEYLVAMFIPIWSGLAYMAM-------
General information:
TITO was launched using:
RESULT:
Template:
1XIO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44438 for 259 contacts (-171.6/contact) +
2D Compatibility (PS) -5112 + (NN) -5399 + (LL) 1700
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -57299.0 ( -221.23 by residue)
QMean score : 0.733
(partial model without unconserved sides chains):
PDB file :
Tito_1XIO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XIO-query.scw
PDB file :
Tito_Scwrl_1XIO.pdb
: