Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVT-VDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIE-WQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDT-MDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
4GUG Chain:A ((57-272))
---------------------EALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKAGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKA---TVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVK----PGQISVADLRTVLTI-
General information:
TITO was launched using:
RESULT:
Template:
4GUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123613 for 1623 contacts (-76.2/contact) +
2D Compatibility (PS) -22905 + (NN) -11674 + (LL) 3084
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -170758.0 ( -105.21 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_4GUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GUG-query.scw
PDB file :
Tito_Scwrl_4GUG.pdb
: