Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDE-FSLNAFNLYGALSMANSG---PNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
2POE Chain:A ((19-171))
-----------------VRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDEIYPELKYDRRGILSMASKGAKKPNTNGSQFFITY----------------------------SSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDI----
General information:
TITO was launched using:
RESULT:
Template:
2POE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57329 for 1158 contacts (-49.5/contact) +
2D Compatibility (PS) -15789 + (NN) -7372 + (LL) 2956
1D Compatibility (HY) -10800 + (ID) 3400
Total energy: -91734.0 ( -79.22 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_2POE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2POE-query.scw
PDB file :
Tito_Scwrl_2POE.pdb
: