Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKISKALTWFIISFIIFHLILFIMWGEHQEYWYLYTGIMLIAGISYVFYQRDIESKRLLTSIGVGIITAIILIMLQLL-FSLITSNLSYSSLIKELARTGVNWKWQMLVTLLFVIPCHELYMRTVLQKELTHFSIPKWIAILITAICSSSLFIYLDNWWIVTFIFVAQVILSLSYEYTRRIATTSVAQIVAIILLLIFNA |
1G2Z Chain:B ((2-32)) | --------------------------------------------------------------------VSKLSQLQTELMAALLESGLSKEALIQALGE------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4823 for 109 contacts (-44.2/contact) +
2D Compatibility (PS) -2919 + (NN) 865 + (LL) 18564
1D Compatibility (HY) 2400 + (ID) 100
Total energy: 13987.0 ( 128.32 by residue)
QMean score : -0.104
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