Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWFKLILDVTTFILIAILLFVYTYKENEEILPDTKYPIAVTDWNKKYSKNEIYKRINQFAKNENVAIYKSTSNYTNKNVDKDIYVFNKSKATTITPFNAKYNIHYLSDDELLKKDIKGSYFVKDKNFDVSKFINFLKEYGVTAESY--KIDHMMIAVGVIKQ----MNIEVPLSALLIVYFIYYIFEKNI-----------NFKAYAIKYLNGFTLRKIIFENFSKKCTYWVTLIISQILLTTSVLWILNYTGNLDLFILRLVLLSCLFILTISVINLWTFLMLLNLNIANMIKGKQHFKTIRFINTVCKSILLVLIASVMIENTSVIKDLNKIKETEKYWNVLDDYYTIEFAPYHETKQSLIDNMLRSEQLVKASEAENNAILFKPKGDSVDNDNFSPDEGNVILVNNQFWSIYYKQFQPDI-------PIKNQKNNVEVII-PQKFHAMRNEINQAYHSWFEFVQNKNNKENKLSIQFINKNDYRIFSFDARDSRHLSFIEAPIIV--NVQASDLSNDFYYAMISQGGYLFKNYDALVKNIENYHLDGEISGITNYKDSVMEMYHENNLKLTVLNFSQIIIAIILIIIILFDVKYYFEQHRKLLVIKKLYGYSTLRANYQYLLINNIVVVFIGILTNVILHSQYIMMIFATILVVQILLQICSLYYHGRRFNEVIKEF |
| 3V9J Chain:A ((20-563)) | -----------------------HMLRWKHTSSLKVANEPILAFSQGSPERDALQKALKDLKGQTEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFC-------YADKALLNRAIDAA-LAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPF-NF---TAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAG--LPPNIIQF---VPADGPTFGDTVTSSEHLCGINFTG------------SVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSS-------------------ADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSS----------------------PSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYG-LTGAVFAQDKAIVQEATRMLRNAAGNFYIN---------------------------DKSTGSVVGQQPFGGARASG---------TNDKPGGPHYILRWTSPQVIKETHKPLGDWRYSYMQ------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266602 for 4591 contacts (-58.1/contact) +
2D Compatibility (PS) -52903 + (NN) 5955 + (LL) 15772
1D Compatibility (HY) 2800 + (ID) 3500
Total energy: -298478.0 ( -65.01 by residue)
QMean score : 0.215
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