Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLYEGKAKRIFSTNQENELRVEYKDEVTAGNGAKKDTMAGKGRLNNQITSIIFKYLQENGIESHFIKQLSETEQLVKPVKIIPLEVVVRNIASGSITKRLGFENGEVFREPLVEFFYKNDALNDPLITDDHVKLLNIASDEDIEILKSKALKINNVLKQLMDAMNLKLVDFKIEFGKTETGQILLADEISPDTCRIWDKATNANFDKDVYRNNTGSLIETYQIFLNKLEDLK
4O7R Chain:A ((11-225))
-------KAKKMIPID-DDKLIMEFKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEHGIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLPLPEGYELPEPIVELYYKNDELHDPMINYYHAKVLGISLDE-IKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLADEISPDTCRFWDAKTKRSLDKDVFRFDKGDLIEAYK----------
General information:
TITO was launched using:
RESULT:
Template:
4O7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48813 for 1632 contacts (-29.9/contact) +
2D Compatibility (PS) -22873 + (NN) -2883 + (LL) 1620
1D Compatibility (HY) -24800 + (ID) 5150
Total energy: -102899.0 ( -63.05 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_4O7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O7R-query.scw
PDB file :
Tito_Scwrl_4O7R.pdb
: