Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNKDDVLKQADNIANKIKNLDTIKTYQQIEAQIHQN-------------QTIKTKMDMLKKHQKQAVNFQNYGKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHSD
3ETU Chain:A ((37-111))
--DSSDLLQREAILANELNILDNLKTFLNLIKEVKTNLNILELENCYYSLQSLRKKMRNNAAYLKQSFNFQ---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ETU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13147 for 245 contacts (53.7/contact) +
2D Compatibility (PS) -5907 + (NN) -1729 + (LL) 5052
1D Compatibility (HY) -4400 + (ID) 850
Total energy: 5313.0 ( 21.69 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_3ETU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ETU-query.scw
PDB file :
Tito_Scwrl_3ETU.pdb
: