Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN |
| 1V54 Chain:I ((20-37)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFHIVGAFMVSLGFATFYKF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7056 for 63 contacts (-112.0/contact) +
2D Compatibility (PS) -1640 + (NN) 2003 + (LL) 16116
1D Compatibility (HY) 800 + (ID) 50
Total energy: 10173.0 ( 161.48 by residue)
QMean score : 0.046
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