Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITV-TVDADKPS-SPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTVAELLPFGFSGKDLE
3R2N Chain:A ((20-125))
-------------ARANSYAPYSNFPVGVAGFVNDGRLITGVNVENASYGLALCAE-CSMISAL---YATGGGRLVAVYCVDGNGDSLMPCGRCRQLLYEHGGPELKI-MT-PKG---VQTMAQLLPQ--------
General information:
TITO was launched using:
RESULT:
Template:
3R2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39451 for 776 contacts (-50.8/contact) +
2D Compatibility (PS) -11133 + (NN) -2908 + (LL) 1484
1D Compatibility (HY) -8000 + (ID) 2500
Total energy: -62508.0 ( -80.55 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_3R2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2N-query.scw
PDB file :
Tito_Scwrl_3R2N.pdb
: