Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTLATLIFLVTLLFVLWQPKGLDIGITALTGAFIAVITGVVSFSDVFEVTGIVWNAT-LTFVSVILISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIILLGAIVAAFFANDGAALILTPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIVSNLVNIISADYFHVGFVRYFSRMIIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKHPKDAINDLKLFKISWIVLV----ILLFGYLISEFTKIPVSIFTGIIAFIFLMLA-------RKSNAVNIKQVIKGAPWNIVLF---SIGMYIVVFGLRNAGITLILAKILEYISNYGLFSTILG-----------------MGFISAFLSSIMNNMPTVLIDAIAIGQSNVHGMLKEGLIYANVIGSDLGPKITPIGSLATLLWLHVLTQKDVKISWGTYFKTGIIITIPVLFITLIGLYLTLIIF |
| 1HL8 Chain:A ((7-447)) | ----------------RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATPDAWFFQNPYAEWYENSLRIKESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGF---CLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFG---------------VYYSGGLDWRFTTEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKGKEDLKYLFAYYYNKHPEGSVNDRWGVPHWDFKTAEYDLPGYKWEFTRGIGLSFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQERLLGLGEWLRKYGDAIYGTSVWERCCAKTEDGTEIRFTRKCNRIFVIFLGIPTGEKIV-IEDLNLSAGTVRHFLTGERLSFKNV-GKNLEITVPKKLLETDSITLVLEAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -457881 for 3214 contacts (-142.5/contact) +
2D Compatibility (PS) -39626 + (NN) 14083 + (LL) 3816
1D Compatibility (HY) 2400 + (ID) 2300
Total energy: -479508.0 ( -149.19 by residue)
QMean score : 0.252
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